FISH 501

Ecosystem Modeling with Ecopath with Ecosim

Credit Value

3 credits

January 7 – March 28, 2019
Lectures are Mondays 1:00 – 3:00 pm and Thursdays 9:00 – 11:00 am
Location: AERL 107/8


The course is focused on how the Ecopath with Ecosim (EwE, modelling framework can be used to address scientific questions related to food web modelling, and notably how to address questions as part of ecosystem-based management. The underlying theories will be introduced throughout, but the emphasis will be on hands-on with actual implementation in the software system.

The course will cover a series of topics:

  • Data requirements and availability
  • Extracting data from online databases, notably FishBase
  • Parameters and mass-balance
  • Network analysis and ecosystem indicators
  • Economic and social aspects: the value chain from producer to consumer
  • Time-dynamic modeling: the foraging arena
  • Fitting ecosystem models to time series data
  • Modeling environmental impacts and mediation
  • Uncertainty, Monte Carlo approaches
  • Management strategy evaluation
  • Using ecosystem modeling for environmental impact assessments
  • Introduction to spatial modeling
  • Spatial modelling with habitat capacity/species distribution models
  • Spatial optimizations/zoning

The participants are asked to make a presentation at the end of the course based on a modelling exercise of their choice. There is no final or mid-term exam, but there will be a number of assignments during the course.

EwE is freely available at, as a Windows-based software. For Mac users there are two options, (1) install Virtual Box and Windows, or (2) use an EwE app for Macs. Participants with Macs are encourage to contact Villy Christensen to discuss this before the course start.

More information

Course Instructor

Dr Villy Christensen

Teaching Assistant

Santiago de la Puente